Project: Purdue    Library: OP__Ba   Updated: 2005-11-15

73344 BES sequenced 68385 BES submitted 93 %

Overall reports
by Run (AGI's clone report) by Plate (AGI report) Overall (AGI report) When sent to Genbank
Missing plates All sequences (68385) All quality files (68385) Sequences via Entrez

Daily reports
BES BES Run/clone Plate Small plate # similar # matching Trimmed Bad
Day plates sequenced submitted % report (AGI) report (AGI) report (AGI) to japonica UniVec PolyA seqs quads
2004-11-25 95,96 1152  1107   Q 96 &radic &radic &radic 540 (48%) 26 ( 2%) 23 ( 2%) 0
2004-11-24 94,95 768  723   Q 94 &radic &radic &radic 313 (43%) 16 ( 2%) 19 ( 2%) 0
2004-11-23 93,94 1152  1121   Q 97 &radic &radic &radic 511 (45%) 25 ( 2%) 19 ( 1%) 0
2004-11-22 92 768  741   Q 96 &radic &radic &radic 350 (47%) 18 ( 2%) 17 ( 2%) 0
2004-11-21 90,91 1152  1105   Q 95 &radic &radic &radic 484 (43%) 31 ( 2%) 19 ( 1%) 0
2004-11-20 89,90 1152  1076   Q 93 &radic &radic &radic 497 (46%) 157 (14%) 20 ( 1%) 0
2004-11-19 88 768  725   Q 94 &radic &radic &radic 330 (45%) 114 (15%) 8 ( 1%) 0
2004-11-18 86,87 1152  1073   Q 93 &radic &radic &radic 461 (42%) 203 (18%) 16 ( 1%) 0
2004-11-17 85,86 768  698   Q 90 &radic &radic &radic 326 (46%) 36 ( 5%) 21 ( 3%) 1 of 8
2004-11-16 84,85 1152  1100   Q 95 &radic &radic &radic 528 (48%) 111 (10%) 24 ( 2%) 0
2004-11-15 83 768  734   Q 95 &radic &radic &radic 331 (45%) 27 ( 3%) 13 ( 1%) 0
2004-11-14 80,81,82 1152  1076   Q 93 &radic &radic &radic 500 (46%) 33 ( 3%) 21 ( 1%) 0
2004-11-13 77,78,79 1152  1080   Q 93 &radic &radic &radic 495 (45%) 56 ( 5%) 17 ( 1%) 0
2004-11-12 76,81,82 1152  1091   Q 94 &radic &radic &radic 464 (42%) 264 (24%) 24 ( 2%) 0
2004-11-11 79,80 768  743   Q 96 &radic &radic &radic 356 (47%) 39 ( 5%) 23 ( 3%) 0
2004-11-10 77,78 768  745   Q 97 &radic &radic &radic 332 (44%) 19 ( 2%) 15 ( 2%) 0
2004-11-09 75 384  360   Q 93 &radic &radic &radic 162 (45%) 58 (16%) 6 ( 1%) 0
2004-11-08 72,73,74 1152  1091   Q 94 &radic &radic &radic 515 (47%) 60 ( 5%) 16 ( 1%) 0
2004-11-07 69,70,71 1152  1111   Q 96 &radic &radic &radic 520 (46%) 32 ( 2%) 20 ( 1%) 0
2004-11-06 66,67,68 1152  1131   Q 98 &radic &radic &radic 523 (46%) 22 ( 1%) 17 ( 1%) 0
2004-11-05 72,73 768  742   Q 96 &radic &radic &radic 342 (46%) 15 ( 2%) 19 ( 2%) 0
2004-11-04 70,71 768  750   Q 97 &radic &radic &radic 349 (46%) 20 ( 2%) 18 ( 2%) 0
2004-11-03 63,64,65 1152  1095   Q 95 &radic &radic &radic 499 (45%) 26 ( 2%) 17 ( 1%) 0
2004-11-02 61,62 768  748   Q 97 &radic &radic &radic 331 (44%) 25 ( 3%) 11 ( 1%) 0
2004-11-01 60 384  370   Q 96 &radic &radic &radic 166 (44%) 10 ( 2%) 7 ( 1%) 0
2004-10-31 58,59 768  736   Q 95 &radic &radic &radic 340 (46%) 17 ( 2%) 17 ( 2%) 0
2004-10-30 55,56,57 1152  930   Q 80 &radic &radic &radic 375 (40%) 22 ( 2%) 18 ( 1%) 0
2004-10-29 54,69 768  729   Q 94 &radic &radic &radic 312 (42%) 16 ( 2%) 12 ( 1%) 0
2004-10-28 67 384  375   Q 97 &radic &radic &radic 200 (53%) 10 ( 2%) 10 ( 2%) 0
2004-10-27 66,75,76 1152  1137   Q 98 &radic &radic &radic 492 (43%) 45 ( 3%) 25 ( 2%) 0
2004-10-26 64,65,74 1152  1134   Q 98 &radic &radic &radic 531 (46%) 32 ( 2%) 27 ( 2%) 0
2004-10-25 62,63 768  735   Q 95 &radic &radic &radic 316 (42%) 17 ( 2%) 12 ( 1%) 0
2004-10-24 58,59,60,61 1536  1486   Q 96 &radic &radic &radic 746 (50%) 38 ( 2%) 34 ( 2%) 2 of 16
2004-10-23 55,56,57 1152  1136   Q 98 &radic &radic &radic 577 (50%) 39 ( 3%) 32 ( 2%) 0
2004-10-22 53,54 768  749   Q 97 &radic &radic &radic 356 (47%) 13 ( 1%) 16 ( 2%) 0
2004-10-20 53 384  378   Q 98 &radic &radic &radic 190 (50%) 12 ( 3%) 9 ( 2%) 0
2004-10-19 52 384  190   Q 49 &radic &radic &radic 56 (29%) 1 ( 0%) 2 ( 1%) 0
2004-10-12 52 384  371   Q 96 &radic &radic &radic 180 (48%) 5 ( 1%) 10 ( 2%) 0
2004-10-09 68 384  379   Q 98 &radic &radic &radic 179 (47%) 6 ( 1%) 14 ( 3%) 0
2004-10-05 50,51 768  748   Q 97 &radic &radic &radic 327 (43%) 14 ( 1%) 13 ( 1%) 0
2004-09-28 48,49 768  759   Q 98 &radic &radic &radic 342 (45%) 17 ( 2%) 19 ( 2%) 0
2004-09-27 46,47 768  752   Q 97 &radic &radic &radic 347 (46%) 18 ( 2%) 20 ( 2%) 0
2004-09-26 43,44,45 1152  1121   Q 97 &radic &radic &radic 502 (44%) 29 ( 2%) 23 ( 2%) 0
2004-09-25 41,42,48 1152  883   Q 76 &radic &radic &radic 373 (42%) 24 ( 2%) 19 ( 2%) 1 of 12
2004-09-24 47,50,51 1152  755   Q 65 &radic &radic &radic 347 (45%) 17 ( 2%) 20 ( 2%) 3 of 12
2004-09-23 49 384  364   Q 94 &radic &radic &radic 152 (41%) 10 ( 2%) 8 ( 2%) 0
2004-09-21 40 384  370   Q 96 &radic &radic &radic 178 (48%) 13 ( 3%) 12 ( 3%) 0
2004-09-20 39,45,46 1152  1107   Q 96 &radic &radic &radic 506 (45%) 25 ( 2%) 21 ( 1%) 2 of 12
2004-09-19 42,43,44 1152  1090   Q 94 &radic &radic &radic 481 (44%) 32 ( 2%) 21 ( 1%) 3 of 12
2004-09-18 41 384  371   Q 96 &radic &radic &radic 197 (53%) 9 ( 2%) 6 ( 1%) 0
2004-09-15 38 384  365   Q 95 &radic &radic &radic 167 (45%) 6 ( 1%) 12 ( 3%) 0
2004-09-12 40 384  356   Q 92 &radic &radic &radic 155 (43%) 4 ( 1%) 4 ( 1%) 1 of 4
2004-09-11 38,39 768  713   Q 92 &radic &radic &radic 306 (42%) 23 ( 3%) 24 ( 3%) 1 of 8
2004-09-03 34,36 768  691   Q 89 &radic &radic &radic 326 (47%) 14 ( 2%) 14 ( 2%) 1 of 8
2004-09-02 36,37 1152  1055   Q 91 &radic &radic &radic 484 (45%) 47 ( 4%) 27 ( 2%) 5 of 12
2004-09-01 35 384  351   Q 91 &radic &radic &radic 162 (46%) 37 (10%) 14 ( 3%) 0
2004-08-31 32,33,34 1152  1081   Q 93 &radic &radic &radic 506 (46%) 30 ( 2%) 28 ( 2%) 3 of 12
2004-08-30 32 384  349   Q 90 &radic &radic &radic 148 (42%) 7 ( 2%) 8 ( 2%) 0
2004-08-29 33,35 768  647   Q 84 &radic &radic &radic 281 (43%) 15 ( 2%) 19 ( 2%) 2 of 8
2004-08-27 30,31 1152  1103   Q 95 &radic &radic &radic 501 (45%) 27 ( 2%) 21 ( 1%) 1 of 12
2004-08-26 29,30 768  736   Q 95 &radic &radic &radic 358 (48%) 17 ( 2%) 12 ( 1%) 2 of 8
2004-08-25 28,29 1152  1121   Q 97 &radic &radic &radic 515 (45%) 57 ( 5%) 22 ( 1%) 3 of 12
2004-08-24 26,27 768  751   Q 97 &radic &radic &radic 327 (43%) 43 ( 5%) 20 ( 2%) 2 of 8
2004-08-23 25 768  755   Q 98 &radic &radic &radic 366 (48%) 44 ( 5%) 24 ( 3%) 1 of 8
2004-08-22 24 768  747   Q 97 &radic &radic &radic 354 (47%) 29 ( 3%) 23 ( 3%) 3 of 8
2004-08-21 22,23 1152  1014   Q 88 &radic &radic &radic 477 (47%) 42 ( 4%) 10 ( 0%) 3 of 12
2004-08-20 22 384  358   Q 93 &radic &radic &radic 162 (45%) 4 ( 1%) 4 ( 1%) 0
2004-08-19 11 384  366   Q 95 &radic &radic &radic 185 (50%) 10 ( 2%) 9 ( 2%) 2 of 4
2004-08-18 10,12 480  420   Q 87 &radic &radic &radic 187 (44%) 10 ( 2%) 15 ( 3%) 1 of 5
2004-08-17 10,11 672  653   Q 97 &radic &radic &radic 298 (45%) 10 ( 1%) 14 ( 2%) 0
2004-08-16 10,21 768  696   Q 90 &radic &radic &radic 312 (44%) 43 ( 6%) 19 ( 2%) 0
2004-08-13 16,17,18 1152  942   Q 81 &radic &radic &radic 384 (40%) 54 ( 5%) 19 ( 2%) 1 of 12
2004-08-12 12 384  369   Q 96 &radic &radic &radic 167 (45%) 12 ( 3%) 14 ( 3%) 2 of 4
2004-08-11 14,15 768  647   Q 84 &radic &radic &radic 261 (40%) 145 (22%) 13 ( 2%) 0
2004-08-09 21 384  359   Q 93 &radic &radic &radic 161 (44%) 3 ( 0%) 5 ( 1%) 0
2004-08-07 18 384  350   Q 91 &radic &radic &radic 147 (42%) 5 ( 1%) 3 ( 0%) 0
2004-08-06 16,17 768  619   Q 80 &radic &radic &radic 279 (45%) 12 ( 1%) 11 ( 1%) 0
2004-08-05 14,15 768  663   Q 86 &radic &radic &radic 283 (42%) 16 ( 2%) 15 ( 2%) 0
2004-08-04 13 768  741   Q 96 &radic &radic &radic 330 (44%) 25 ( 3%) 19 ( 2%) 0
2004-08-01 8,9 768  729   Q 94 &radic &radic &radic 324 (44%) 28 ( 3%) 17 ( 2%) 3 of 8
2004-07-31 7,8 1152  1033   Q 89 &radic &radic &radic 480 (46%) 33 ( 3%) 24 ( 2%) 5 of 12
2004-07-30 6 768  748   Q 97 &radic &radic &radic 337 (45%) 32 ( 4%) 15 ( 2%) 5 of 8
2004-07-29 4,5 1152  1043   Q 90 &radic &radic &radic 478 (45%) 24 ( 2%) 23 ( 2%) 4 of 12
2004-07-28 3,4 768  678   Q 88 &radic &radic &radic 288 (42%) 16 ( 2%) 18 ( 2%) 1 of 8
2004-07-27 3 384  289   Q 75 &radic &radic &radic 115 (39%) 4 ( 1%) 3 ( 1%) 4 of 4
2004-01-04 1,2 1536  1503   Q 97 &radic &radic &radic 687 (45%) 51 ( 3%) 34 ( 2%) 4 of 16
2004-01-03 19,20,26,27 2304  2223   Q 96 &radic &radic &radic 1048 (47%) 50 ( 2%) 49 ( 2%) 8 of 24
Total 73344 68385 93

Note: An "NS" (Not Sent) in the "sequences submitted" column means that the sequences are ready for submission to Genbank but have not actually been submitted.

For the daily reports, clicking on the number of sequences submitted will retrieve those sequences. Clicking on the "Q" next to the sequences will retrieve the quality files. Clicking on the Japonica similarity number will retrieve the BLAT comparison output. The BLAT options were "minScore=150" and "fastMap"; both designed to find fairly exact DNA to DNA matches.

Runs done in Jan. 2004 (dated 2004-01-xx) are runs that were obtained in a non-pipeline manner. As an example, runs obtained directly from AGI. Since we are not sure when the runs were done we make up a fake date for them.